torchdms
Contents:
Introduction
Installation
Tutorials
Command line interface
Specifying models
API Reference
torchdms
torchdms.analysis
torchdms.cli
torchdms.data
torchdms.evaluation
torchdms.loss
torchdms.model
torchdms.plot
torchdms.utils
torchdms.utils.activation_of_string
torchdms.utils.build_beta_map
torchdms.utils.cartesian_product
torchdms.utils.cat_list_values
torchdms.utils.count_variants_with_a_mutation_towards_an_aa
torchdms.utils.defunkified_str
torchdms.utils.float_list_of_comma_separated_string
torchdms.utils.from_json_file
torchdms.utils.from_pickle_file
torchdms.utils.get_first_key_with_an_option
torchdms.utils.get_mutation_indicies
torchdms.utils.get_observed_training_mutations
torchdms.utils.get_only_entry_from_constant_list
torchdms.utils.make_all_possible_mutations
torchdms.utils.make_cartesian_product_hierarchy
torchdms.utils.make_legal_filename
torchdms.utils.parse_sites
torchdms.utils.positions_in_list
torchdms.utils.to_json_file
torchdms.utils.to_pickle_file
torchdms
»
torchdms
»
torchdms.utils
»
torchdms.utils.parse_sites
torchdms.utils.parse_sites
¶
torchdms.utils.
parse_sites
(
site_dict
,
model
)
[source]
¶
Parse site dictionary and return beta indicies for given alphabet.