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Overview:

  • Introduction
  • Installation
  • Examples

Nextflow Pipeline:

  • Alignments Pipeline
  • Input files
  • Pipeline results
  • Parameters
  • Optional Parameters

Python API:

  • Utils
  • Normalize
  • Modeling
  • Eigen
  • Escape Profile

Command Line Interface:

  • Command Line Interface

Streamlit Viz App

  • Streamlit Viz App

Methods Descriptions

  • Comparing Escape Profiles
  • Background Modeling

The Rest of It

  • Gotchas
  • Contributing
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  • Search

© Copyright 2024, Jared G. Galloway, Kevin Sung.

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